Search Results for "workbench"

A suite of tools for analysing small RNA (sRNA) data from Next Generation Sequencing devices. Including expression profiling of known mirco RNA (miRNA), identification of novel miRNA in deep-sequencing data and identification of other interesting landmarks within high-throughput genetic data

Biomedical Text Mining (BioTM) is providing valuable approaches to the automated curation of scientific literature.

...Newer version and smaller file size can be found at: https://sourceforge.net/projects/dstk3/ It is designed to be straight forward and easy to use, and familar to SPSS user. While JASP offers more statistical features, DSTK tends to be a broad solution workbench, including text analysis and predictive analytics features. Of course you may specify JASP for advanced data editing and RapidMiner for advanced prediction modeling. DSTK is written in C#, Java and Python to interface with R, NLTK, and Weka. It can be expanded with plugins using R Scripts. We have also created plugins for more statistical functions, and Big Data Analytics with Microsoft Azure HDInsights (Spark Server) with Livy. ...

An open source workbench for chemo- and bioinformatics built on the Eclipse Rich Client Platform (RCP).

(Diver is in the process of being moved to GitHub. Please find us at https://github.com/thechiselgroup/Diver. Support requests & messages sent here may never be seen.) Dynamic Interactive Views For Reverse Engineering. Div/er is a set of Eclipse Plugins that aid developers in understanding software. It uses dynamic analysis and reverse engineering to offer views and filters that aid comprehension and discovery.

...However, in principle, the number of species to be included programmatically is unlimited. (2) You can use a variety of growth functions via typing them in as a string on the GUI. (3) The model is transparent, sinc it comes with the Eclipse workbench of RePast.

This Java software implements Profile Hidden Markov Models (PHMMs) for protein classification for the WEKA workbench. Standard PHMMs and newly introduced binary PHMMs are used. In addition the software allows propositionalisation of PHMMs.

Co-op is a workbench for the definition and use of composition operators: abstractions that can encapsulate standard solutions such as coding idioms, design patterns and composition techniques, and can later be (re-) used just like library classes.

Proper is a propositionalization framework written in Java containing several algorithms for generating propositional (and also multi-instance) data from relational databases. It produces data that can be used by the WEKA machine learning workbench.

KeplerWeka adds the functionality of the open-source machine learning and data mining workbench WEKA to the free and open-source, scientific workflow application, Kepler.

SLEDRIDE: Simplified Learning about Expression Data Running in a Desktop Environment. To provide a general workbench for pipe-lining microarray gene expression data from supervised learning results into unsupervised learning methods.

The FBench is the ongoing development of an open-source graphical software tool for embedded automation components and systems based on the IEC 61499 standard. The project originates from the OOONEIDA Workbench pioneered by Dr. James Christensen in 2005.

This is an Eclipse Plugin that allows upload and download from SFTP servers, the plugin is customisable on different levels, either at a workbench, project level, has the ability to recurse subdirectories of files and setup an ignore list of files.

hypKNOWsys aims at developing a Java-based workbench for knowledge discovery and knowledge management. Currently, hypKNOWsys has released two intermediate tools: DIAsDEM Workbench (text mining for semantic tagging) and WUMprep (Web mining pre-processing)

jMATLAB is a eclipse based workbench for scientific computing

OpenChem Workbench is an enterprise software suite designed for creating, saving, searching, and exchanging chemical data. It uses existing tools (NIST, Gaussian, CHEMKIN) and its own (easy molecule building, mechanism management, group additivity, etc.)

This project aims to create a block oriented visual workbench for general purpose systems modelling and simulation. In the first milestone, we`ll build a simple GUI and the basic blocks to model neural network training and internetwork topologies.