Search Results for "svm"

A set of java programs that extract coordinate and chemical information from PDB files. The binding site regions are extracted using grid based scheme. For binding site, spatio-chemical descriptor is generated based on PocketMatch algorithm of Dr. Kalidas (author of this project too).

GA/SVM for feature selection in microarraydata

...Currently the code can read BioNLP shared task format (http://2011.bionlp-st.org/) and i2b2 Natural Language Processing for Clinical Data shared task format (https://www.i2b2.org/NLP/DataSets/Main.php). Event extraction includes finding events and the parameters for an event in a text. The method is based on SVM but other ML algorithms can be adopted. The method details are explained in the following paper: Ehsan Emadzadeh, Azadeh Nikfarjam, and Graciela Gonzalez. 2011. Double Layered Learning for Biological Event Extraction from Text. In Proceedings of the BioNLP 2011 Workshop Companion Volume for Shared Task, Portland, Oregon, June. ...

MultiViL is a tool for multi-view learning. It supports four classifiers (KNN, Naive-Bayes, Rochio and SVM-Perf), four view combining methods (Majority Voting, Borda Count, Dempster-Shafer theory of evidence and PSO) and provides many analisys tools.

Feating constructs a classification ensemble comprising a set of local models. It is effective at reducing the error of both stable and unstable learners, including SVM. For details see the paper at http://dx.doi.org/10.1007/s10994-010-5224-5.

Train and Validate QSAR models using state-of-the-art learning algorithms like SVM. Build classification and regression and use them to make predictions. The whole project is intended to serve the need for toxicological predictions.