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Showing 4 open source projects for "optimization"

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1

K-OPLS

An implementation of the Kernel-based Orthogonal Projections to Latent Structures (K-OPLS) method for MATLAB and R. The supplied functionality includes e.g. cross-validation, kernel parameter optimization, model diagnostics and plot tools.

Downloads: 1 This Week

Last Update: 2014-12-05
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2

Deem

Analyze time-course data with significance tests, clustering, modeling

...Apply significance tests to filter out only significant genes or time series. Cluster time series into similar groups. Generate network models, including linear or non-linear models. Variable selection and optimization routines included. Written in Scala and R. The application is a cross-platform desktop app with a simple GUI and is fully functional currently. The app was and is developed at the University of Rochester (http://cbim.urmc.rochester.edu) under the GPL 3.0 license. This is a fork of that project.

Downloads: 0 This Week

Last Update: 2015-02-01
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3

MetaBoFlux

Metaboflux is a generic approach for predicting flux distribution in metabolic networks under multiple and various constraints deducted from the experiments, to increase the biological relevance of the model.

Downloads: 0 This Week

Last Update: 2013-04-16
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4

R-based genetic algorithm.

R based genetic algorithm for optimization, variable selection and other machine learning and statistical analysis approaches.

Downloads: 0 This Week

Last Update: 2013-04-19
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