Search Results for "simple-xml"
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Showing 88 open source projects for "simple-xml"
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Simple Event Correlator (SEC) is a lightweight event correlator for network management, log file monitoring, security management, fraud detection, and other tasks which involve event correlation.
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Th3inspector
Best Tool For Information Gathering
...It exposes a single command-line entrypoint (Th3inspector.pl) with many switches for common reconnaissance tasks — examples include website info, whois, MX lookup, geo-IP, subdomain discovery, CMS detection, port scanning, and Cloudflare real-IP resolution — so a user can chain many checks from one script. The project provides simple install wrappers for Linux, Android/Termux and even instructions for Windows (Perl + CPAN modules), and includes helper scripts to update or install dependencies automatically. The repository is actively packaged as versioned releases in the README (current noted version 1.9) and is distributed under an MIT license. -
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metaf2xml
Parse and decode METAR, TAF, SYNOP, BUOY, AMDAR and write data as XML
metaf2xml can download, parse and decode aviation routine weather reports (METAR, SPECI, SAO), aerodrome forecasts (TAF), synoptic observations (SYNOP), observations from buoys (BUOY) and meteorological reports from aircrafts (AMDAR). Data can also be taken from decoded BUFR messages. The extracted data can be written as XML or passed to a user-defined function (all done in Perl). It also provides XSLT style sheets to convert the XML to plain language (text, HTML), or XML with different schemas. A web-based (CGI) user interface can be used to download and display up-to-date weather data from NOAA, Ogimet, and other sources. -
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Systems Biology Markup Language (SBML)
A file format for exchanging computational models in systems biology
The Systems Biology Markup Language (SBML) is an XML-based description language for representing computational models in systems biology. Visit the project web site to learn more. -
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Krishnamurti's Book of Life D.Thoughts
Jiddu Krishnamurti's Book of Life|Libro de la Vida
FREE distribution of the JAVA-XML multiplatform e-book about Jiddu Krishnamurti's Book of Life (a witty daily cookie-like reflection). Ahora, lea diariamente los pensamientos de Krishnamurti en castellano- Obtenga una agenda gratis. -
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A header file (cexcept.h) that provides Try/Throw/Catch macros similar to those available in C++ for error handling.
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RefDB is a reference database and bibliography tool for SGML, XML, and LaTeX documents, sort of a Reference Manager or BibTeX for markup languages. It is portable and known to run on Linux, Free/NetBSD, OSX, Solaris, and Windows/Cygwin.
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autoplot
Simple Gnuplot automation and plot conversion tool.
Autoplot is a simple Perl script to plot Gnuplot files with simple dependency checking and conversion of the plots to different formats using rsvg-convert. The Gnuplot scripts must plot to a SVG terminal and output the result to STDOUT for the script to work as intended. The script reads all .gnuplot files in the working directory and creates SVG plots from them in svg subdirectory. -
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The Simplest Manual Counter
Manual counter with the keyboard or the mouse on images
...After associating a key to each item, or a predefined graphical symbol for images, pressing the key or clicking on the image increments its associated counter, and displays (for the images) the symbol at the mouse's pointer location. Such a project is so simple a child could use it! -
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This is software to create web dictionaries, esp. for Esperanto like Reta Vortaro (http://reta-vortaro.de). A dictionary is made from articles written in a special XML dialect by transformations using XSLT, ant and some Java code.
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New Debian package available 30th April 2021, lots of bugs corrected. Simple system for displaying civic features, opportunities and problems on a rasterised map. Currently to map 'informal gardening' and foraging for useful items on the street. Simple to set up and use. Can be parametrised for specific usage. Installation description, to be expanded in: https://sourceforge.net/p/datamap/wiki/Installation/
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silico
Libraries and scripts for molecular modelling written in Perl
A perl molecular toolkit designed to assist in general molecular modelling activities. Silico provides file format conversion, molecular manipulation and analysis and a simple way to write wrapper scripts around other preexisting software packages. -
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htcontrol
controls high-temperature single-crystal XRD experiments using IPDSII
...htcontrol is written in Perl and runs on a cygwin platform to be installed on the WinXP/10 host. Data collections are performed with Stoe's WinXpose (>=1.7.3) via the non-interactive XML interface. For details see: J. Appl. Crystallogr. 42(1), 140-142, DOI:10.1107/S0021889808035607 -
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The ChIP-Seq software provides methods for the analysis of ChIP-seq data and other types of mass genome annotation data. The most common analysis tasks include positional correlation analysis, peak detection, and genome partitioning into signal-rich and signal-depleted regions.
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RaspiVMC
VMC control with a Raspberry PI
Remote control of a Storkair/sehnder mechanical ventilation system (VMC) via a Raspberry Pi. This allow for the integration of the VMC in a domotica system (providing compatible domotica software) -
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Accent Tool Suite
Accent interfaces and controls systems through goals and policies
Accent (Advanced Component Control Enhancing Network Technologies) is a comprehensive tool suite that interfaces a variety of communications systems and allows these systems to be controlled through goals (high-level user aims) and policies (lower-level system rules). Accent has been applied to the domains of: o Call Control: for telecommunications, particularly call control in Internet telephony o Home Care: for home automation and telecare, particularly for domestic appliances... -
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owfs and owhttpd
Project moved to https://github.com/owfs/owfs/
...OWHTTPD -- same system, only used as a light weight web server. OWFS is also ported to embedded routers, Mac OSX and Windows. Basically you can use these inexpensive little sensors and other chips with very simple wiring to sense and control the physical environment. The interface is very flexible -- everything from a web browser, to read and writing directly to the chip's "file" to integrating with your programs -- even over the internet. There is a growing number of 1-wire sensors: temperature, voltage, humidity, light, ultraviolet, pressure, thermisters, thermocouples, programmable microcontrollers, relays, lights, LCD panels, etc -
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TekDS820
Drive your obsolete Tek oscilloscope remotely with python
Control a Tek TDS-820 remotely via a GPIB interface using linux-gpib, python, matplotlib and tkinter. The programming manual is used to generate an XML schema which is then used to assist in building extra functionality into the tkinter user interface. -
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mfsizes
Multi-FASTA sequence (DNA or protein) statistics calculator.
A simple command-line utility to calculate biological sequence (DNA or protein) sizes in a (multi) FASTA file. It gives averages, GC (or methionine) content, N50, N90, N95, number of N's, and total bases, and can also report by codon if requested. -
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MOIRAI
Simple Scientific Workflow System for CAGE Analysis
Cap analysis of gene expression (CAGE) is a sequencing based technology to capture the 5’ ends of RNAs in a biological sample. After mapping, a CAGE peak on the genome indicates the position of an active transcriptional start site (TSS) and the number of reads correspond to its expression level. CAGE is prominently used in both the FANTOM and ENCODE project. MOIRAI is a compact yet flexible workflow system designed to carry out the main steps in data processing and analysis of CAGE data.... -
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ViralFusionSeq [VFS]
Accurately discover viral integration events and fusion transcripts
...https://hpc.nih.gov/apps/ViralFusionSeq/ ViralFusionSeq (VFS) is a versatile high-throughput sequencing (HTS) tool for discovering viral integration events and reconstruct fusion transcripts at single-base resolution. VFS combines soft-clipping information, read-pair analysis, and targeted de novo assembly to discover and annotate viral-human fusion events. A simple yet effective empirical statistical model is used to evaluate the quality of fusion breakpoints. Minimal user defined parameters are required. Source code with user manual and installation guide of VFS is available at sourceforge's "Files" section. Citation: http://www.ncbi.nlm.nih.gov/pubmed/ -
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ISVASE
identification of sequence variant associated with splicing event
...However, there is little bioinformatics tools to directly identify sequence variants associated with splicing events (SVASE) based on RNA-seq data. We developed ISVASE, a simple and convenient tool for identifying SVASE directly using RNA-seq data. Comparing with the existing software PVAAS, our method has several advantages such as stringent rule-depended filters and statistical filters in each step, detection sequence variants for known splicing events, identification sequence variants in two parts of splicing (junction) separately, detection junction shift events if providing known splicing annotation, evaluating splicing signal, comparing with known DNA mutation and/or RNA editing data, and short running time. -
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BioC
We describe a simple XML format to share text documents and annotation
A minimalist approach to share text documents and data annotations. Allows a large number of different annotations to be represented. Project files contain: - simple code to hold/read/write data and perform sample processing. - BioC-formatted corpora - BioC tools that work with BioC corpora BioC goals - simplicity - interoperability - broad use - reuse There should be little investment required to learn to use a format or a software module to process that format. We are interested in reuse, and we focus on common NLP tasks that are broadly useful for textmining. -
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Projet sumtec
Nettoyage et préparation de corpus de transcriptions d'entretiens
...id=623 Le projet contient 3 programmes PERL. L'objectif consiste à récupérer des transcriptions d'entretien non structurées afin de les structurer sous la forme d'un arbre xml. L'intérêt consiste à pouvoir, in fine, identifier les tours de parole et séparer les discours des interviewés et des intervieweurs. -
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Collaborative infrastructure for Collaborative Product Development (manufacturing) within Extended and Virtual Enterprise.
