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@BioJulia

BioJulia

Bioinformatics and Computational Biology in Julia

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  1. GenomeGraphs.jl GenomeGraphs.jl Public

    A modern genomics framework for julia

    Julia 70 7

  2. BioSequences.jl BioSequences.jl Public

    Biological sequences for the julia language

    Julia 162 52

  3. Contributing Contributing Public

    Documentation, guidelines, and policy on contributing to all BioJulia repositories

    16 6

  4. BioCore.jl BioCore.jl Public

    Core types and interfaces for BioJulia packages

    Julia 32 11

  5. BioSymbols.jl BioSymbols.jl Public

    Nucleic and amino acid primitive types

    Julia 32 14

  6. GeneticVariation.jl GeneticVariation.jl Public

    Datastructures and algorithms for working with genetic variation

    Julia 44 18

Repositories

Showing 10 of 90 repositories
  • BufferIO.jl Public

    The buffer is the interface

    BioJulia/BufferIO.jl’s past year of commit activity
    Julia 19 MIT 0 3 0 Updated Dec 5, 2025
  • MemoryViews.jl Public

    Simple, low-level views into memory in Julia

    BioJulia/MemoryViews.jl’s past year of commit activity
    Julia 23 MIT 1 0 1 Updated Dec 4, 2025
  • BioSequences.jl Public

    Biological sequences for the julia language

    BioJulia/BioSequences.jl’s past year of commit activity
    Julia 162 MIT 52 19 (1 issue needs help) 7 Updated Dec 4, 2025
  • BGZFLib.jl Public

    Read and write BGZF files

    BioJulia/BGZFLib.jl’s past year of commit activity
    Julia 4 MIT 0 0 0 Updated Dec 4, 2025
  • BioStructures.jl Public

    A Julia package to read, write and manipulate macromolecular structures

    BioJulia/BioStructures.jl’s past year of commit activity
    Julia 106 25 10 2 Updated Dec 1, 2025
  • SingleCellProjections.jl Public

    Analysis of Single Cell Expression data in Julia

    BioJulia/SingleCellProjections.jl’s past year of commit activity
    Julia 24 3 4 0 Updated Nov 28, 2025
  • FormatSpecimens.jl Public

    Biological file format specimens for testing packages, and functions to assist in testing.

    BioJulia/FormatSpecimens.jl’s past year of commit activity
    Julia 15 3 0 0 Updated Nov 18, 2025
  • BioJulia/GenomicAnnotations.jl’s past year of commit activity
    Julia 18 MIT 4 1 0 Updated Nov 12, 2025
  • CIGARStrings.jl Public

    Read and write Concise Idiosyncratic Gapped Alignment Reports.

    BioJulia/CIGARStrings.jl’s past year of commit activity
    Julia 1 MIT 0 0 1 Updated Oct 23, 2025
  • XAMAuxData.jl Public

    Read auxiliary data fields in SAM, GFA and PAF formats

    BioJulia/XAMAuxData.jl’s past year of commit activity
    Julia 3 MIT 0 1 1 Updated Oct 23, 2025