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rnaseq Public
Forked from EmanuelSoda/rnaseqRNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
Nextflow MIT License UpdatedOct 22, 2025 -
chipseq Public
Forked from EmanuelSoda/chipseqChIP-seq peak-calling, QC and differential analysis pipeline.
Nextflow MIT License UpdatedOct 22, 2025 -
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atacseq Public
Forked from EmanuelSoda/atacseqATAC-seq peak-calling, QC and differential analysis pipeline
Nextflow MIT License UpdatedSep 5, 2023 -
crisprseq Public
Forked from nf-core/crisprseqA pipeline for the analysis of CRISPR edited data. It allows the evaluation of the quality of gene editing experiments using targeted next generation sequencing (NGS) data (`targeted`) as well as t…
Nextflow MIT License UpdatedJul 20, 2023 -
LiverE12.5_shinyapp Public
Forked from FabioBedin/LiverE12.5Shiny app for single cell visualization mouse LiverE12.5
R UpdatedMar 21, 2023 -
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datasharing Public
Forked from jtleek/datasharingThe Leek group guide to data sharing
UpdatedNov 25, 2013