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oh-my-posh Public
Forked from JanDeDobbeleer/oh-my-poshThe most customisable and low-latency cross platform/shell prompt renderer
Go MIT License UpdatedSep 24, 2025 -
pango Public
Forked from pantherdb/pangoTypeScript BSD 3-Clause "New" or "Revised" License UpdatedSep 19, 2025 -
system-prompts-and-models-of-ai-tools Public
Forked from x1xhlol/system-prompts-and-models-of-ai-toolsFULL Augment Code, Claude Code, Cluely, CodeBuddy, Cursor, Devin AI, Junie, Kiro, Leap.new, Lovable, Manus Agent Tools, NotionAI, Orchids.app, Perplexity, Poke, Qoder, Replit, Same.dev, Trae, Trayc…
GNU General Public License v3.0 UpdatedSep 17, 2025 -
seurat Public
Forked from satijalab/seuratR toolkit for single cell genomics
R Other UpdatedJul 30, 2025 -
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ganon Public
Forked from pirovc/ganonganon2 classifies genomic sequences against large sets of references efficiently, with integrated download and update of databases (refseq/genbank), taxonomic profiling (ncbi/gtdb), binning and hie…
Python MIT License UpdatedApr 10, 2025 -
scRNA-seq_python_course_2024 Public
Forked from Functional-Genomics/scRNA-seq_python_course_2024Course materials for EBI course scRNA-seq analysis in Python, 2024
Jupyter Notebook UpdatedFeb 11, 2025 -
rnaseq Public
Forked from nf-core/rnaseqRNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
Nextflow MIT License UpdatedJan 13, 2025 -
autogrow4 Public
Forked from durrantlab/autogrow4AutoGrow4 is an open-source program for semi-automated computer-aided drug discovery. It uses a genetic algorithm to evolve predicted ligands on demand and so is not limited to a virtual library of…
Python Apache License 2.0 UpdatedDec 4, 2024 -
TTMD Public
Forked from molecularmodelingsection/TTMDPython code to run Thermal Titration Molecular Dynamics (TTMD) simulations
Python MIT License UpdatedSep 12, 2024 -
chipseq Public
Forked from nf-core/chipseqChIP-seq peak-calling, QC and differential analysis pipeline.
Nextflow MIT License UpdatedAug 9, 2024 -
VSCoding-Sequence Public
Forked from molstar/VSCoding-SequenceVSCode Extension for interactively visualising protein structure data in the editor
TypeScript MIT License UpdatedJul 31, 2024 -
iqb-2024 Public
Forked from janash/iqb-2024Notebooks and environment set up for IQB 2024 workshop
Jupyter Notebook BSD 3-Clause "New" or "Revised" License UpdatedJul 12, 2024 -
cbioportal Public
Forked from cBioPortal/cbioportalcBioPortal for Cancer Genomics
Java GNU Affero General Public License v3.0 UpdatedJun 4, 2024 -
taipy Public
Forked from Avaiga/taipyTurns Data and AI algorithms into production-ready web applications in no time.
Python Apache License 2.0 UpdatedMay 26, 2024 -
openfold Public
Forked from aqlaboratory/openfoldTrainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2
Python Apache License 2.0 UpdatedMay 21, 2024 -
foldseek Public
Forked from steineggerlab/foldseekFoldseek enables fast and sensitive comparisons of large structure sets.
C GNU General Public License v3.0 UpdatedApr 15, 2024 -
napari Public
Forked from napari/naparinapari: a fast, interactive, multi-dimensional image viewer for python
Python BSD 3-Clause "New" or "Revised" License UpdatedApr 4, 2024 -
KinaseDocker2 Public
Forked from APAJanssen/KinaseDocker2A PyMOL plugin with accompanying Docker image for kinase inhibitor binding and affinity prediction
Python GNU General Public License v3.0 UpdatedApr 3, 2024 -
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gradio Public
Forked from gradio-app/gradioBuild and share delightful machine learning apps, all in Python. 🌟 Star to support our work!
Python Apache License 2.0 UpdatedFeb 14, 2024 -
chroma Public
Forked from generatebio/chromaA generative model for programmable protein design
Python Apache License 2.0 UpdatedJan 22, 2024 -
scRNA-seq Public
Forked from ktrns/scrnaseqWorkflow for single-cell RNA-seq analysis using Seurat
HTML MIT License UpdatedJan 14, 2024 -
DockQ Public
Forked from wallnerlab/DockQDockQ is a single continuous quality measure for protein docked models based on the CAPRI evaluation protocol
Python GNU General Public License v3.0 UpdatedDec 29, 2023 -
scikit-image Public
Forked from scikit-image/scikit-imageImage processing in Python
Python Other UpdatedDec 23, 2023 -
CAMP Public
Forked from twopin/CAMPpredicting peptide-protein interactions
Python UpdatedDec 23, 2023 -
plotly.py Public
Forked from plotly/plotly.pyThe interactive graphing library for Python ✨ This project now includes Plotly Express!
Python MIT License UpdatedDec 21, 2023 -
MMseqs2 Public
Forked from soedinglab/MMseqs2MMseqs2: ultra fast and sensitive search and clustering suite
C GNU General Public License v3.0 UpdatedDec 7, 2023 -
evodock Public
Forked from Andre-lab/evodockA Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking
Python UpdatedNov 30, 2023 -
Parallel computing with task scheduling
Python BSD 3-Clause "New" or "Revised" License UpdatedNov 25, 2023