Search Results for "mpi" - Page 5
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Showing 217 open source projects for "mpi"
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LSE_Solver
System of linear equations solver
LSE_Solver is a program that solves system of linear equations using MPI library in c language. -
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PMGR_COLLECTIVE defines a protocol and an API designed to enable MPI jobs to startup in a flexible, scalable manner. This library enables MPI processes to exchange information with each other through a series of collective operations.
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Parallel SCVT generator, using a new method for the parallel computation of Spherical Delaunay Triangulations. Uses Jonathan Shewchuk's Triangle http://www.cs.cmu.edu/~quake/triangle.html
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parallel_pmap
parallelized pmap
A parallellized (MPI/OpenMP) version of the pmap utility from player/stage project. With manual correction in coarse phase. -
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KDT provides domain experts with a simple interface to analyze very large graphs quickly and effectively without requiring knowledge of the underlying graph representation or algorithms. It provides a Python interface and can run on clusters.
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OMPISpecto
OpenMPI tool for monitoring openMPI applications
Open MPI application monitoring (and steering) from a web-interface and a mobile device. -
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A test project for computation of electron quantum transport properties of graphene ribbons. The computational results were published in Physical Review B 83, 245442 (2011). Fortran 90 + BLAS + LAPACK + MPI.
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ViennaX
A flexible plugin execution framework for scientific computing in C++
...A plugin system allows to wrap already available functionality into reusable components, which can have data input and output dependencies via a socket system. Different scheduler kernels are available, supporting serial and MPI-based distributed executions, supporting task and data parallelism. -
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SCR caches checkpoint data in storage on the compute nodes of a Linux cluster to provide a fast, scalable checkpoint / restart capability for MPI codes.
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SPSens
Stochastic parameter sensitivity analysis for chemical networks
...Additionally the package includes basic stochastic simulation algorithms. The package includes several example networks which can be easily modified for other networks. Serial and parallel MPI implementations can be built and called from the command line. The serial implementation of the package can also be called from Matlab via the MEX interface with limited functionality. It supports many user specified options, including the use of antithetic sampling that can be used in some cases to increase efficiency. -
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DecGPU: CUDA-based Error Correction
The first distributed and parallel short-read error corrector on GPUs
DecGPU (Distributed Error correction on GPUs) is a parallel and distributed error correction algorithm for large-scale short read assembly. It is implemented using CUDA C++ and MPI, running on a GPU cluster. -
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MPICH2: A high-performance implementation of Message Passing Interface (MPI) standard (both MPI-1 and MPI-2)
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OptLib
C nonlinear optimization library
[PROJECT MIGRATED TO GIT-HUB] OptLib is a library of nonlinear optimization routines focused on the use of stochastic methods, including Simulated Annealing, Genetic Algorithms, and Monte Carlo. Routines are parallelized using MPI. -
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ePICC
a tool for process identification and controller design
ePICC (easy Process Identification and Controller Configuration) is a Open-Source-Solution for quick controller configuration on Siemens SIMATIC S7-PLCs. It creates a mathematical model of the process and let you choose from a variety of controllers. -
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LIME
LIME is a software tool for creating multiphysics simulation codes.
The Lightweight Integrating Multiphysics Environment for coupling codes (LIME) is a small software package for creating multiphysics simulation codes. LIME is intended to be especially useful when separate computer codes (which may be written in any standard computer language) already exist to solve di fferent parts of a multiphysics problem. LIME provides the key high-level software (written in C++), a well defi ned approach (with example templates), and interface requirements to enable the... -
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This project is a tool for beginners to understand why a MPI program works or doesn't. It aims simple MPI codes, with a modest number of Processes. It is a real time view of an executing code, providing help even when the program deadlocks.
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Extract and append variables in parallel from a NetCDF file. Uses combine-batched asynchronous I/O with Parallel-NetCDF 1.2. Arena memory is managed to prevent swapping and fragmentation. Allows header padding, variable alignment and 64bit format.
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MPM-GIMP is a parallelized implementation of the Material Point Method [Sulsky 1994,1995] and Generalized Interpolation Material Point method [Bardenhagen 2004] written in C++ with MPI, Scons and Python.
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pMap is an MPI-based tool to parallelize the alignment step of state-of-the-art sequence mapping programs. It allows transparent execution of the alignment step of a selected program in parallel on a compute-cluster.
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...(Made for my diploma for bachelor degree). Supports: wavefront .obj format (for models). Custom-made scene xml format. Scene data represented by Tree format. Uses MPI / OpenMP.
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A low memory scaling distributed 3D FFT library. The library is designed for calculating complex‐to‐complex Fast Fourier Transforms (FFT’s) on 3‐D distributed data. It is based on FORTRAN90 and MPI with the underlying FFT calculated using FFTW3.
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...Currently it enables you to get time solvetions for three-level systems. It's generates files with time solvetions for density matrix. In the future It will solve multilevel atomic system on MPI.
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This project is part of the Python Course at UPF . The aim is to build python module to do molecular superposition using molecular interaction potentials MIP ( for this take a look at the project MIPGEN ).
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A Message-Passing Interface (MPI) library, allowing a Java application to efficiently run on a distributed, parallel, and high performance architecture. Developed within HPJava project (www.hpjava.org), and maintained by LarKC project (www.larkc.eu)
