Abstract
Hypopharyngeal squamous cell carcinoma (HPSCC) is a highly aggressive malignancy with a poor prognosis. This study elucidates the role of the E3 ubiquitin ligase Tripartite Motif Containing 15 (Trim15) and its substrate, mitochondrial voltage-dependent anion channel 3 (VDAC3), in regulating autophagy, mitophagy, and chemoresistance in HPSCC. We found that Trim15 is significantly downregulated in HPSCC tissues and inhibits cell proliferation and migration in FaDu and Detroit 562 cells. Trim15 stabilizes VDAC3 via K6-linked ubiquitination, thereby suppressing autophagy and mitophagy while elevating reactive oxygen species (ROS) levels. VDAC3 knockdown enhances autophagy and mitophagy, concomitantly reducing ROS and promoting cancer cell survival. High-concentration ethanol suppresses Trim15 and VDAC3 expression, suggesting an adaptive response to oxidative stress. Notably, chloroquine (CQ), an autophagy inhibitor, enhances HPSCC sensitivity to 5-fluorouracil (5-FU), with synergistic effects observed in xenograft models. These findings establish the Trim15-VDAC3-mitophagy axis as a critical regulator of HPSCC progression and chemoresistance, offering a novel therapeutic target for augmenting the efficacy of autophagy inhibitors in combination with standard chemotherapy.

Similar content being viewed by others
References
Newman JR, Connolly TM, Illing EA, Kilgore ML, Locher JL, Carroll WR. Survival trends in hypopharyngeal cancer: a population-based review. Laryngoscope. 2015;125:624–9.
Yasumatsu R, Manako T, Jiromaru R, Hashimoto K, Wakasaki T, Matsuo M, et al. Clinical management of early-stage hypopharyngeal squamous cell carcinoma: a single-institution clinical analysis. Ear Nose Throat J. 2023;102:NP313–NP318.
Imanishi Y, Ozawa H, Sakamoto K, Fujii R, Shigetomi S, Habu N, et al. Clinical outcomes of transoral videolaryngoscopic surgery for hypopharyngeal and supraglottic cancer. BMC Cancer. 2017;17:445.
Su CW, Lee JC, Chang YF, Su NW, Lee PH, Dai KY, et al. Delta-volume radiomics of induction chemotherapy to predict outcome of subsequent chemoradiotherapy for locally advanced hypopharyngeal cancer. Tumori. 2022;108:450–60.
Huang N, Sun X, Li P, Liu X, Zhang X, Chen Q, et al. TRIM family contributes to tumorigenesis, cancer development, and drug resistance. Exp Hematol Oncol. 2022;11:75.
Gu J, Chen J, Xiang S, Zhou X, Li J. Intricate confrontation: research progress and application potential of TRIM family proteins in tumor immune escape. J Adv Res. 2023;54:147–79.
Hatakeyama S. TRIM family proteins: roles in autophagy, immunity, and carcinogenesis. Trends Biochem Sci. 2017;42:297–311.
Zhao G, Liu C, Wen X, Luan G, Xie L, Guo X. The translational values of TRIM family in pan-cancers: from functions and mechanisms to clinics. Pharmacol Ther. 2021;227:107881.
Han D, Wang L, Long L, Su P, Luo D, Zhang H, et al. The E3 ligase TRIM4 facilitates SET ubiquitin-mediated degradation to enhance ER-alpha action in breast cancer. Adv Sci. 2022;9:e2201701.
Zhong T, Zhang J, Liu X, Li H. TRIM17-mediated ubiquitination and degradation of RBM38 promotes cisplatin resistance in non-small cell lung cancer. Cell Oncol. 2023;46:1493–507.
Pan X, Chen Y, Shen Y, Tantai J. Knockdown of TRIM65 inhibits autophagy and cisplatin resistance in A549/DDP cells by regulating miR-138-5p/ATG7. Cell Death Dis. 2019;10:429.
Liang M, Wang L, Sun Z, Chen X, Wang H, Qin L, et al. E3 ligase TRIM15 facilitates non-small cell lung cancer progression through mediating Keap1-Nrf2 signaling pathway. Cell Commun Signal. 2022;20:62.
Cai H, Zhao J, Zhang Q, Wu H, Sun Y, Guo F, et al. Ubiquitin ligase TRIM15 promotes the progression of pancreatic cancer via the upregulation of the IGF2BP2-TLR4 axis. Biochim Biophys Acta Mol Basis Dis. 2024;1870:167183.
Sun Y, Ren D, Yang C, Yang W, Zhao J, Zhou Y, et al. TRIM15 promotes the invasion and metastasis of pancreatic cancer cells by mediating APOA1 ubiquitination and degradation. Biochim Biophys Acta Mol Basis Dis. 2021;1867:166213.
Lee OH, Lee J, Lee KH, Woo YM, Kang JH, Yoon HG, et al. Role of the focal adhesion protein TRIM15 in colon cancer development. Biochim Biophys Acta. 2015;1853:409–21.
Chai F, Wang G, Shen Y, Niu Y, Huang Y, Fu T, et al. KGF impedes TRIM21-enhanced stabilization of keratin 10 mediating differentiation in hypopharyngeal cancer. Cell Signal. 2025;127:111614.
Callegari S, Kirk NS, Gan ZY, Dite T, Cobbold SA, Leis A, et al. Structure of human PINK1 at a mitochondrial TOM-VDAC array. Science. 2025;388:303–10.
Rumgay H, Murphy N, Ferrari P, Soerjomataram I. Alcohol and cancer: epidemiology and biological mechanisms. Nutrients 2021;13:3173.
Zeng J, Tang Y, Wu P, Fang X, Wang W, Fan Y, et al. Alcohol consumption, tobacco smoking, betel quid chewing and oral health associations with hypopharyngeal cancer among men in Central South China: a case-control study. Cancer Manag Res. 2019;11:6353–64.
Maasland DH, van den Brandt PA, Kremer B, Goldbohm RA, Schouten LJ. Alcohol consumption, cigarette smoking and the risk of subtypes of head-neck cancer: results from the Netherlands Cohort Study. BMC Cancer. 2014;14:187.
Chen W, Lu C, Hong J. TRIM15 exerts anti-tumor effects through suppressing cancer cell invasion in gastric adenocarcinoma. Med Sci Monit. 2018;24:8033–41.
Kulathu Y, Komander D. Atypical ubiquitylation—the unexplored world of polyubiquitin beyond Lys48 and Lys63 linkages. Nat Rev Mol Cell Biol. 2012;13:508–23.
Elia AE, Boardman AP, Wang DC, Huttlin EL, Everley RA, Dephoure N, et al. Quantitative proteomic Atlas of ubiquitination and acetylation in the DNA damage response. Mol Cell. 2015;59:867–81.
Zhang J, Sun Z, Han Y, Yao R, Yue L, Xu Y, et al. Rnf2 knockdown reduces cell viability and promotes cell cycle arrest in gastric cancer cells. Oncol Lett. 2017;13:3817–22.
Durcan TM, Fon EA. USP8 and PARK2/parkin-mediated mitophagy. Autophagy. 2015;11:428–9.
Michel MA, Swatek KN, Hospenthal MK, Komander D. Ubiquitin linkage-specific affimers reveal insights into K6-linked ubiquitin signaling. Mol Cell. 2017;68:233–46.e235.
Narendra D, Kane LA, Hauser DN, Fearnley IM, Youle RJ. p62/SQSTM1 is required for Parkin-induced mitochondrial clustering but not mitophagy; VDAC1 is dispensable for both. Autophagy. 2010;6:1090–106.
Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, et al. Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization. Nature. 2013;496:372–6.
Sun Y, Vashisht AA, Tchieu J, Wohlschlegel JA, Dreier L. Voltage-dependent anion channels (VDACs) recruit Parkin to defective mitochondria to promote mitochondrial autophagy. J Biol Chem. 2012;287:40652–60.
Zhao Z, Song X, Wang Y, Yu L, Huang G, Li Y, et al. E3 ubiquitin ligase TRIM31 alleviates dopaminergic neurodegeneration by promoting proteasomal degradation of VDAC1 in Parkinson’s disease model. Cell Death Differ. 2024;31:1410–21.
Geisler S, Holmström KM, Skujat D, Fiesel FC, Rothfuss OC, Kahle PJ, et al. PINK1/Parkin-mediated mitophagy is dependent on VDAC1 and p62/SQSTM1. Nat Cell Biol. 2010;12:119–31.
Ham SJ, Lee D, Yoo H, Jun K, Shin H, Chung J. Decision between mitophagy and apoptosis by Parkin via VDAC1 ubiquitination. Proc Natl Acad Sci USA. 2020;117:4281–91.
Reina S, Palermo V, Guarnera A, Guarino F, Messina A, Mazzoni C, et al. Swapping of the N-terminus of VDAC1 with VDAC3 restores full activity of the channel and confers anti-aging features to the cell. FEBS Lett. 2010;584:2837–44.
De Pinto V, Guarino F, Guarnera A, Messina A, Reina S, Tomasello FM, et al. Characterization of human VDAC isoforms: a peculiar function for VDAC3? Biochim Biophys Acta. 2010;1797:1268–75.
Reina S, Guarino F, Magri A, De Pinto V. VDAC3 as a potential marker of mitochondrial status is involved in cancer and pathology. Front Oncol. 2016;6:264.
Reina S, Nibali SC, Tomasello MF, Magri A, Messina A, De Pinto V. Voltage-dependent anion channel 3 (VDAC3) protects mitochondria from oxidative stress. Redox Biol. 2022;51:102264
Debnath J, Gammoh N, Ryan KM. Autophagy and autophagy-related pathways in cancer. Nat Rev Mol Cell Biol. 2023;24:560–75.
Miller DR, Thorburn A. Autophagy and organelle homeostasis in cancer. Dev Cell. 2021;56:906–18.
Yang Y, Zhu Y, Zhou S, Tang P, Xu R, Zhang Y, et al. TRIM27 cooperates with STK38L to inhibit ULK1-mediated autophagy and promote tumorigenesis. EMBO J. 2022;41:e109777.
Zhang R, Li SW, Liu L, Yang J, Huang G, Sang Y. TRIM11 facilitates chemoresistance in nasopharyngeal carcinoma by activating the beta-catenin/ABCC9 axis via p62-selective autophagic degradation of Daple. Oncogenesis. 2020;9:45.
Maldonado EN, Lemasters JJ. Warburg revisited: regulation of mitochondrial metabolism by voltage-dependent anion channels in cancer cells. J Pharmacol Exp Ther. 2012;342:637–41.
Heslop KA, Milesi V, Maldonado EN. VDAC modulation of cancer metabolism: advances and therapeutic challenges. Front Physiol. 2021;12:742839.
Acknowledgements
This study was supported by the Natural Science Foundation of Shandong Province (ZR2022MH073), National Natural Science Foundation of China (81672662), Qingdao Medical and Health Science and Technology Program (2021-WJZD184), and Clinical Medicine + X Scientific Research Project of Affiliated Hospital of Qingdao University (QDFY + X202101012).
Author information
Authors and Affiliations
Contributions
Guangyi Wang: Conceptualization; Methodology and Investigation; Formal Analysis; Writing-original draft. Yibang Shen and Lin Wang: Conceptualization; Methodology and Investigation; Fangyu Chai and Mingjin Xu: Methodology and Investigation. Yichuan Huang and Tao Fu: Resources. Yan Jiang: Conceptualization; Project administration and Funding acquisition. Jisheng Zhang: Conceptualization; Writing-review and editing and Validation; Project administration and Funding acquisition. The work reported in the article has been performed by the authors, unless clearly specified in the text. All authors approved the submitted version.
Corresponding authors
Ethics declarations
Competing interests
The authors declare no competing interests.
Additional information
Publisher’s note Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
Supplementary information
Rights and permissions
Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
About this article
Cite this article
Wang, G., Shen, Y., Wang, L. et al. Trim15 stabilizes VDAC3 via ubiquitination to suppress autophagy and enhance chemosensitivity in hypopharyngeal squamous cell carcinoma. Cell Death Discov. (2026). https://doi.org/10.1038/s41420-026-02943-0
Received:
Revised:
Accepted:
Published:
DOI: https://doi.org/10.1038/s41420-026-02943-0


